| Transcript ID | HUVEC |
|---|---|
| ENST00000357084 | 0.763±0.55 |
| ENST00000536376 | 1.383±0.00 |
ANGIOGENES: A knowledge database for angiogenesis
Institute of Cardiovascular Regeneration, Goethe University Frankfurt
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000196296  |
ATP2A1 | 9606 | + |
16:28878405-28904509  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000357084 |
ATP2A1-001 | 28878405-28904464 | protein_coding | ||
| ENST00000395503 |
ATP2A1-002 | 28878488-28904509 | protein_coding | ||
| ENST00000536376 |
ATP2A1-003 | 28880053-28904464 | protein_coding | ||
| ENST00000562185 |
ATP2A1-008 | 28879243-28882580 | protein_coding | ||
| ENST00000563975 |
ATP2A1-007 | 28878861-28882551 | protein_coding | ||
| ENST00000564112 |
ATP2A1-010 | 28903373-28903826 | protein_coding | ||
| ENST00000564470 |
ATP2A1-005 | 28888897-28894219 | nonsense_mediated_decay | ||
| ENST00000564732 |
ATP2A1-009 | 28887663-28900618 | nonsense_mediated_decay | ||
| ENST00000565042 |
ATP2A1-006 | 28888897-28894219 | processed_transcript | ||
Expression Patterns
|
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0005388 | IDA:IEA | calcium-transporting ATPase activity |
| GO:0005509 | ISS | calcium ion binding |
| GO:0005515 | IPI | protein binding |
| GO:0005524 | ISS | ATP binding |
| GO:0005789 | IDA | endoplasmic reticulum membrane |
| GO:0005793 | ISS | endoplasmic reticulum-Golgi intermediate compartment |
| GO:0006200 | ISS | ATP catabolic process |
| GO:0006816 | IDA:IEA | calcium ion transport |
| GO:0006942 | IMP | regulation of striated muscle contraction |
| GO:0007596 | TAS | blood coagulation |
| GO:0008152 | IEA | metabolic process |
| GO:0008637 | IMP | apoptotic mitochondrial changes |
| GO:0016020 | ISS | membrane |
| GO:0016021 | NAS:IEA | integral component of membrane |
| GO:0016529 | ISS | sarcoplasmic reticulum |
| GO:0031095 | TAS | platelet dense tubular network membrane |
| GO:0031448 | IDA | positive regulation of fast-twitch skeletal muscle fiber contraction |
| GO:0031673 | IDA | H zone |
| GO:0031674 | IDA | I band |
| GO:0032470 | IMP | positive regulation of endoplasmic reticulum calcium ion concentration |
| GO:0032471 | IMP | negative regulation of endoplasmic reticulum calcium ion concentration |
| GO:0033017 | TAS | sarcoplasmic reticulum membrane |
| GO:0034220 | TAS | ion transmembrane transport |
| GO:0034704 | IC | calcium channel complex |
| GO:0034976 | IMP | response to endoplasmic reticulum stress |
| GO:0042803 | IPI | protein homodimerization activity |
| GO:0045988 | IMP | negative regulation of striated muscle contraction |
| GO:0046872 | IEA | metal ion binding |
| GO:0048471 | ISS | perinuclear region of cytoplasm |
| GO:0051561 | IMP | positive regulation of mitochondrial calcium ion concentration |
| GO:0051659 | IMP | maintenance of mitochondrion location |
| GO:0055085 | TAS | transmembrane transport |
| GO:0070059 | IMP | intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress |
| GO:0070509 | IMP | calcium ion import |
| GO:0070588 | IEA | calcium ion transmembrane transport |
| GO:0090076 | IDA | relaxation of skeletal muscle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000020574
|
atp2a1 | protein_coding | Danio_rerio | ||
|
ENSDARG00000035458
|
atp2a1l | protein_coding | Danio_rerio | ||
|
ENSMUSG00000030730
|
Atp2a1 | protein_coding | Mus_musculus | ||
