ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: mitochondrial ribosomal protein L42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198015 MRPL42 9606 + 12:93467488-93516213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358678 MRPL42-002 93467518-93502661 nonsense_mediated_decay
  ENST00000393128 MRPL42-003 93467517-93502652 protein_coding
  ENST00000547098 MRPL42-006 93467518-93488472 protein_coding
  ENST00000548545 MRPL42-005 93469214-93487897 protein_coding
  ENST00000549561 MRPL42-007 93469189-93502864 nonsense_mediated_decay
  ENST00000549982 MRPL42-001 93467488-93516213 protein_coding
  ENST00000551396 MRPL42-008 93467540-93501385 nonsense_mediated_decay
  ENST00000552217 MRPL42-004 93467516-93501576 protein_coding
  ENST00000552326 MRPL42-010 93467517-93501291 processed_transcript
  ENST00000552938 MRPL42-009 93500747-93502621 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000358678ENST00000393128ENST00000547098ENST00000549561ENST00000549982ENST00000552217ENST00000552326ENST00000552938
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000358678 1.734±0.00 N/A N/A N/A N/A
ENST00000393128 5.030±0.00 6.365±2.21 3.687±0.00 14.528±0.00 5.786±3.27
ENST00000547098 5.655±0.00 N/A N/A N/A 0.756±0.00
ENST00000549561 7.247±0.00 N/A N/A N/A N/A
ENST00000549982 0.307±0.17 0.987±0.48 N/A 0.923±0.00 0.893±0.61
ENST00000552217 N/A 7.783±3.88 N/A 15.323±0.00 10.028±4.39
ENST00000552326 11.154±0.00 18.815±4.01 N/A N/A 13.782±0.00
ENST00000552938 N/A N/A 4.694±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005X9 CIL_0005X9_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 NAS structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005763 IDA mitochondrial small ribosomal subunit
GO:0005886 IDA plasma membrane
GO:0006412 NAS translation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079391 mrpl42 protein_coding Danio_rerio
ENSMUSG00000062981 Mrpl42 protein_coding Mus_musculus

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