ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L23a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198242 RPL23A 9606 + 17:28719393-28724359 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355731 RPL23A-003 28720299-28723992 protein_coding
  ENST00000394935 RPL23A-004 28720264-28723933 protein_coding
  ENST00000394938 RPL23A-009 28720244-28723936 protein_coding
  ENST00000422514 RPL23A-001 28719393-28724359 protein_coding
  ENST00000472628 RPL23A-006 28720569-28723936 protein_coding
  ENST00000496182 RPL23A-002 28720079-28723936 protein_coding
  ENST00000578181 RPL23A-011 28720705-28723800 protein_coding
  ENST00000580755 RPL23A-010 28723300-28723937 retained_intron
  ENST00000582736 RPL23A-008 28719991-28721261 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000355731ENST00000394935ENST00000422514ENST00000582736
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000355731 711.931±60.93 247.690±37.42 N/A 91.909±0.00 105.293±122.14
ENST00000394935 371.568±0.00 N/A 182.499±0.00 223.807±0.00 253.383±133.04
ENST00000422514 68.035±15.11 71.015±16.66 21.096±0.00 54.774±0.00 110.886±110.54
ENST00000582736 242.259±18.99 112.179±16.16 N/A 97.283±0.00 943.090±1357.38

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000DE CIL_0000DE_0002 CGP
CIL_0004ZJ CIL_0004ZJ_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008283 IMP cell proliferation
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0019843 IEA rRNA binding
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0031932 ISS TORC2 complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006316 rpl23a protein_coding Danio_rerio
ENSMUSG00000078126 Rpl23a-ps3 protein_coding Mus_musculus

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