ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: major histocompatibility complex, class I, F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204642 HLA-F 9606 + 6:29722775-29738528 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259951 HLA-F-003 29723408-29727296 protein_coding
  ENST00000334668 HLA-F-202 29723340-29726525 protein_coding
  ENST00000376861 HLA-F-001 29722775-29726526 protein_coding
  ENST00000414333 HLA-F-004 29723279-29724231 protein_coding
  ENST00000429294 HLA-F-006 29724039-29726526 protein_coding
  ENST00000434407 HLA-F-002 29723464-29726526 protein_coding
  ENST00000444621 HLA-F-005 29725534-29727296 protein_coding
  ENST00000462777 HLA-F-007 29723392-29724415 processed_transcript
  ENST00000465459 HLA-F-014 29725054-29738528 processed_transcript
  ENST00000475996 HLA-F-013 29725454-29729351 processed_transcript
  ENST00000482257 HLA-F-009 29723434-29725087 processed_transcript
  ENST00000484704 HLA-F-012 29724157-29726526 processed_transcript
  ENST00000485513 HLA-F-011 29723940-29725299 processed_transcript
  ENST00000486194 HLA-F-010 29723504-29724352 processed_transcript
  ENST00000489502 HLA-F-008 29723427-29726526 processed_transcript
  ENST00000606273 HLA-F-015 29724417-29726528 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000334668ENST00000376861ENST00000429294ENST00000434407ENST00000475996ENST00000482257ENST00000484704ENST00000485513ENST00000489502ENST00000606273
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000334668 N/A 0.393±0.00 N/A N/A 1.445±0.58
ENST00000376861 N/A N/A N/A N/A 0.810±0.00
ENST00000429294 8.820±0.34 5.006±2.25 37.614±0.00 11.915±0.00 2.663±2.64
ENST00000434407 N/A 3.425±1.54 N/A 9.925±0.00 N/A
ENST00000475996 N/A 0.190±0.00 N/A N/A 0.475±0.05
ENST00000482257 6.656±0.05 3.060±1.17 N/A 18.973±0.00 8.099±0.00
ENST00000484704 N/A N/A 16.654±0.00 N/A N/A
ENST00000485513 N/A N/A N/A N/A 1.122±0.63
ENST00000489502 N/A 4.372±1.19 59.488±0.00 N/A 5.254±0.40
ENST00000606273 N/A 3.204±0.97 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000420 CIL_000420_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA:TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002480 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005886 TAS plasma membrane
GO:0006955 IEA immune response
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IDA membrane
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0030670 TAS phagocytic vesicle membrane
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0046978 IPI TAP1 binding
GO:0046979 IPI TAP2 binding
GO:0050776 TAS regulation of immune response
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037334 H2-M1 protein_coding Mus_musculus
ENSMUSG00000037537 H2-M11 protein_coding Mus_musculus
ENSMUSG00000067201 H2-M9 protein_coding Mus_musculus

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