ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: sorting nexin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205302 SNX2 9606 + 5:122774996-122830108 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379516 SNX2-001 122774996-122830108 protein_coding
  ENST00000505854 SNX2-004 122775095-122803869 retained_intron
  ENST00000505934 SNX2-012 122775082-122815973 protein_coding
  ENST00000506847 SNX2-009 122816923-122829773 processed_transcript
  ENST00000506874 SNX2-003 122775082-122775676 processed_transcript
  ENST00000507321 SNX2-007 122827321-122829755 retained_intron
  ENST00000507852 SNX2-010 122827434-122828046 retained_intron
  ENST00000509281 SNX2-006 122815568-122817340 retained_intron
  ENST00000510372 SNX2-002 122795536-122829671 processed_transcript
  ENST00000511365 SNX2-005 122803494-122808711 retained_intron
  ENST00000512394 SNX2-013 122775079-122817018 nonsense_mediated_decay
  ENST00000514030 SNX2-008 122817275-122827752 retained_intron
  ENST00000514949 SNX2-011 122775203-122829755 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000379516ENST00000505854ENST00000505934ENST00000506847ENST00000507321ENST00000510372ENST00000512394
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000379516 8.114±0.00 8.898±5.69 18.646±0.00 13.879±0.00 11.575±7.04
ENST00000505854 N/A N/A N/A N/A 6.048±1.49
ENST00000505934 N/A 3.313±0.00 N/A 9.606±0.00 13.981±1.39
ENST00000506847 10.425±0.00 12.719±7.75 21.487±0.00 9.643±0.00 N/A
ENST00000507321 17.963±0.00 N/A N/A N/A N/A
ENST00000510372 N/A 4.391±2.20 N/A 3.846±0.00 12.134±1.36
ENST00000512394 N/A 8.825±2.14 N/A N/A 11.415±7.07

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005KK CIL_0005KK_0002 CGP
CIL_0004B0 CIL_0004B0_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005154 IDA epidermal growth factor receptor binding
GO:0005158 IDA insulin receptor binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006886 IBA:IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0010008 IDA endosome membrane
GO:0016020 IDA membrane
GO:0016023 IBA cytoplasmic membrane-bounded vesicle
GO:0030904 IEA retromer complex
GO:0035091 IBA:IEA phosphatidylinositol binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043234 IDA protein complex
GO:0051259 IDA protein oligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:1990459 IDA transferrin receptor binding
GO:1990460 IDA leptin receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000034484 Snx2 protein_coding Mus_musculus

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