ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: carnitine palmitoyltransferase 1B (muscle)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205560 CPT1B 9606 - 22:50568861-50578465 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312108 CPT1B-004 50568862-50578417 protein_coding
  ENST00000360719 CPT1B-201 50569338-50577915 protein_coding
  ENST00000395650 CPT1B-001 50569084-50578455 protein_coding
  ENST00000405237 CPT1B-005 50568861-50578020 protein_coding
  ENST00000417176 CPT1B-008 50576940-50578246 protein_coding
  ENST00000423069 CPT1B-020 50572875-50576064 nonsense_mediated_decay
  ENST00000457250 CPT1B-202 50569338-50577915 protein_coding
  ENST00000460853 CPT1B-007 50576626-50578465 retained_intron
  ENST00000461117 CPT1B-009 50576707-50577868 retained_intron
  ENST00000475238 CPT1B-013 50571883-50573100 retained_intron
  ENST00000476790 CPT1B-010 50576056-50576903 retained_intron
  ENST00000479886 CPT1B-011 50574365-50574982 retained_intron
  ENST00000497224 CPT1B-014 50570348-50572297 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000312108ENST00000360719ENST00000395650
Transcript ID HAoEC HUVEC
ENST00000312108 N/A 2.552±2.26
ENST00000360719 N/A 0.445±0.00
ENST00000395650 0.562±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00028I CIL_00028I_0001 CGP
CIL_0002HR CIL_0002HR_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004095 IEA carnitine O-palmitoyltransferase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005741 TAS mitochondrial outer membrane
GO:0006635 IEA fatty acid beta-oxidation
GO:0006853 TAS carnitine shuttle
GO:0008152 IEA metabolic process
GO:0015909 IEA long-chain fatty acid transport
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058285 cpt1b protein_coding Danio_rerio
ENSMUSG00000078937 Cpt1b protein_coding Mus_musculus

Loading