ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: queuine tRNA-ribosyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213339 QTRT1 9606 + 19:10701430-10713437 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000250237 QTRT1-001 10701451-10713365 protein_coding
  ENST00000421333 QTRT1-003 10701454-10713437 nonsense_mediated_decay
  ENST00000585885 QTRT1-010 10701454-10709138 processed_transcript
  ENST00000587500 QTRT1-012 10712663-10713364 retained_intron
  ENST00000587599 QTRT1-008 10701466-10712397 nonsense_mediated_decay
  ENST00000587861 QTRT1-005 10711040-10713364 retained_intron
  ENST00000589488 QTRT1-002 10701430-10713345 retained_intron
  ENST00000590705 QTRT1-006 10701454-10712256 retained_intron
  ENST00000591643 QTRT1-009 10707306-10712255 protein_coding
  ENST00000592254 QTRT1-007 10701471-10707563 protein_coding
  ENST00000592376 QTRT1-011 10712563-10713359 protein_coding
  ENST00000592531 QTRT1-013 10712918-10713364 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000250237ENST00000587861ENST00000589488ENST00000590705ENST00000592254ENST00000592376
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000250237 39.010±0.80 9.053±4.72 N/A 14.001±0.00 13.564±10.55
ENST00000587861 N/A N/A N/A N/A 3.422±2.32
ENST00000589488 10.816±0.04 3.308±0.17 30.372±0.00 5.677±0.00 5.796±5.88
ENST00000590705 N/A N/A N/A N/A 2.930±3.72
ENST00000592254 N/A 11.674±3.59 N/A N/A N/A
ENST00000592376 57.121±0.00 13.929±4.98 50.639±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002S9 CIL_0002S9_0001 CGP
CIL_00076W CIL_00076W_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006400 TAS:IEA tRNA modification
GO:0008033 IEA tRNA processing
GO:0008479 TAS:IEA queuine tRNA-ribosyltransferase activity
GO:0008616 ISS:IEA queuosine biosynthetic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043105 qtrt1 protein_coding Danio_rerio
ENSMUSG00000002825 Qtrt1 protein_coding Mus_musculus

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