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ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: tetraspanin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214063 TSPAN4 9606 + 11:842808-867116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346501 TSPAN4-017 847197-866776 protein_coding
  ENST00000397396 TSPAN4-201 842824-867116 protein_coding
  ENST00000397397 TSPAN4-001 842808-867111 protein_coding
  ENST00000397404 TSPAN4-202 844446-867116 protein_coding
  ENST00000397406 TSPAN4-203 844081-867116 protein_coding
  ENST00000397408 TSPAN4-204 842941-867116 protein_coding
  ENST00000397411 TSPAN4-006 842812-866817 protein_coding
  ENST00000409531 TSPAN4-005 848810-867111 protein_coding
  ENST00000409543 TSPAN4-007 844117-866857 protein_coding
  ENST00000464987 TSPAN4-002 847197-867109 retained_intron
  ENST00000468468 TSPAN4-003 862297-867109 retained_intron
  ENST00000494815 TSPAN4-004 863272-867111 retained_intron
  ENST00000524895 TSPAN4-012 847197-864653 retained_intron
  ENST00000525201 TSPAN4-015 844153-866676 protein_coding
  ENST00000525334 TSPAN4-016 843339-865753 protein_coding
  ENST00000526055 TSPAN4-013 847197-862834 retained_intron
  ENST00000527644 TSPAN4-010 849816-865740 protein_coding
  ENST00000529566 TSPAN4-014 862345-865825 retained_intron
  ENST00000530404 TSPAN4-011 843315-862741 protein_coding
  ENST00000532375 TSPAN4-018 847197-865942 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000346501ENST00000397396ENST00000397397ENST00000397404ENST00000397406ENST00000397408ENST00000397411ENST00000409543ENST00000464987ENST00000468468ENST00000525201ENST00000527644ENST00000529566ENST00000532375
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000346501 N/A N/A N/A 19.343±0.00 48.027±0.00
ENST00000397396 36.766±0.00 16.025±7.32 N/A N/A N/A
ENST00000397397 63.648±4.23 20.097±7.58 48.712±0.00 10.106±0.00 25.370±18.41
ENST00000397404 N/A N/A N/A N/A 6.921±0.01
ENST00000397406 29.416±0.00 5.716±0.55 28.528±0.00 12.146±0.00 20.345±12.74
ENST00000397408 31.998±0.00 17.784±3.54 N/A 13.528±0.00 21.116±5.24
ENST00000397411 N/A 32.775±0.00 N/A N/A 14.442±10.14
ENST00000409543 N/A 16.585±3.58 N/A N/A N/A
ENST00000464987 N/A N/A N/A N/A 0.293±0.00
ENST00000468468 N/A N/A N/A N/A 0.218±0.00
ENST00000525201 N/A 33.408±10.74 N/A 33.927±0.00 29.902±18.64
ENST00000527644 N/A 25.873±0.56 N/A N/A N/A
ENST00000529566 N/A N/A N/A N/A 1.425±0.00
ENST00000532375 N/A 33.130±1.89 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003EQ CIL_0003EQ_0001 CGP
CIL_0003ER CIL_0003ER_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003823 IDA antigen binding
GO:0005178 IPI integrin binding
GO:0005515 IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006461 IDA protein complex assembly
GO:0016021 IEA integral component of membrane
GO:0031982 IDA vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089354 tspan4a protein_coding Danio_rerio
ENSMUSG00000025511 Tspan4 protein_coding Mus_musculus

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