ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: protocadherin gamma subfamily C, 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000240184 PCDHGC3 9606 + 5:141475947-141512979 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308177 PCDHGC3-001 141476003-141512979 protein_coding
  ENST00000611950 PCDHGC3-003 141475947-141478795 protein_coding
  ENST00000616230 PCDHGC3-004 141475996-141477756 processed_transcript
  ENST00000617222 PCDHGC3-006 141476001-141511230 protein_coding
  ENST00000617641 PCDHGC3-002 141475980-141512977 protein_coding
  ENST00000621008 PCDHGC3-005 141475999-141477227 protein_coding
  ENST00000622656 PCDHGC3-007 141476004-141507291 processed_transcript
  ENST00000622836 PCDHGC3-008 141508070-141511527 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000308177ENST00000617641
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000308177 N/A 14.407±3.50 18.152±0.00 24.881±11.69
ENST00000617641 45.447±0.00 27.345±6.27 29.692±0.00 72.735±42.91

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000630 CIL_000630_000Q CGP
CIL_000630 CIL_000630_000P CGP
CIL_000630 CIL_000630_0012 CGP
CIL_000630 CIL_000630_0011 CGP
CIL_000630 CIL_000630_0015 CGP
CIL_000630 CIL_000630_000Y CGP
CIL_000630 CIL_000630_000S CGP
CIL_000630 CIL_000630_0014 CGP
CIL_000630 CIL_000630_000U CGP
CIL_000630 CIL_000630_000T CGP
CIL_000630 CIL_000630_000Z CGP
CIL_000630 CIL_000630_000V CGP
CIL_000630 CIL_000630_0016 CGP
CIL_000630 CIL_000630_0013 CGP
CIL_000630 CIL_000630_000R CGP
CIL_000630 CIL_000630_000W CGP
CIL_000630 CIL_000630_0010 CGP
CIL_000630 CIL_000630_000X CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 NAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000102918 Pcdhgc3 protein_coding Mus_musculus

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