ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SOGA family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000255330 SOGA3 9606 - 6:127438406-127519355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000464495 SOGA3-003 127450187-127475473 nonsense_mediated_decay
  ENST00000473298 SOGA3-002 127444039-127476064 nonsense_mediated_decay
  ENST00000474293 SOGA3-004 127453870-127475694 processed_transcript
  ENST00000481848 SOGA3-001 127438406-127519001 nonsense_mediated_decay
  ENST00000556132 SOGA3-201 127438406-127519355 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000464495ENST00000473298ENST00000474293ENST00000481848ENST00000556132
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000464495 N/A N/A N/A 0.056±0.00
ENST00000473298 0.420±0.14 N/A N/A 0.049±0.02
ENST00000474293 N/A N/A 0.197±0.00 0.062±0.00
ENST00000481848 0.009±0.00 0.022±0.00 N/A 0.010±0.00
ENST00000556132 0.007±0.00 N/A N/A 0.023±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001EL CIL_0001EL_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0010506 IEA regulation of autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063311 soga3a protein_coding Danio_rerio
ENSDARG00000075455 soga3b protein_coding Danio_rerio
ENSMUSG00000038916 Soga3 protein_coding Mus_musculus

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