ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001497 Pax9 10090 + 12:56691767-56712822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001538 Pax9-201 56695639-56712822 protein_coding
  ENSMUST00000152848 Pax9-002 56695729-56710346 retained_intron
  ENSMUST00000153250 Pax9-001 56691767-56712707 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000001538ENSMUST00000152848ENSMUST00000153250
Transcript ID C166 Tie2+ EC mES
ENSMUST00000001538 N/A 0.015±0.01 N/A
ENSMUST00000152848 0.015±0.00 N/A 0.082±0.00
ENSMUST00000153250 N/A N/A 0.027±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007LS CIL_0007LS_0003 UCNEbase
CIL_0008XR CIL_0008XR_0002 VISTA
CIL_0008R1 CIL_0008R1_0002 VISTA
CIL_00091S CIL_00091S_0002 VISTA
CIL_0007TC CIL_0007TC_0002 VISTA
CIL_0007XY CIL_0007XY_0002 VISTA
CIL_00045C CIL_00045C_0002 CGP
CIL_0000OF CIL_0000OF_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IMP RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0007492 IMP endoderm development
GO:0009887 TAS organ morphogenesis
GO:0042476 IGI odontogenesis
GO:0042481 IGI regulation of odontogenesis
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060325 IGI face morphogenesis
GO:0071363 IDA cellular response to growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053829 pax9 protein_coding Danio_rerio
ENSG00000198807 PAX9 paired box 9 protein_coding Homo_sapiens

Loading