ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002221 Paxip1 10090 - 5:27740080-27791691 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002291 Paxip1-001 27740080-27791550 protein_coding
  ENSMUST00000196605 Paxip1-006 27783579-27791383 retained_intron
  ENSMUST00000196641 Paxip1-008 27759732-27765737 retained_intron
  ENSMUST00000196734 Paxip1-007 27772479-27791395 nonsense_mediated_decay
  ENSMUST00000197625 Paxip1-002 27744085-27751295 retained_intron
  ENSMUST00000199714 Paxip1-005 27786545-27790373 retained_intron
  ENSMUST00000199993 Paxip1-004 27781449-27791691 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000002291ENSMUST00000197625ENSMUST00000199714
Transcript ID C166 Tie2+ EC mES
ENSMUST00000002291 4.374±1.91 2.200±1.24 1.975±0.45
ENSMUST00000197625 N/A 12.557±0.00 N/A
ENSMUST00000199714 N/A 1.024±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000K5 CIL_0000K5_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000416 IMP positive regulation of histone H3-K36 methylation
GO:0001570 IMP vasculogenesis
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006351 IEA transcription, DNA-templated
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0010212 IEA response to ionizing radiation
GO:0030330 IEA DNA damage response, signal transduction by p53 class mediator
GO:0031398 IMP positive regulation of protein ubiquitination
GO:0035066 IMP positive regulation of histone acetylation
GO:0035097 IDA histone methyltransferase complex
GO:0043542 IMP endothelial cell migration
GO:0045830 IMP positive regulation of isotype switching
GO:0051568 IEA histone H3-K4 methylation
GO:0051571 IMP positive regulation of histone H3-K4 methylation
GO:0060261 IMP positive regulation of transcription initiation from RNA polymerase II promoter
GO:0060612 IMP adipose tissue development
GO:0060717 IMP chorion development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005606 paxip1 protein_coding Danio_rerio
ENSG00000157212 PAXIP1 PAX interacting (with transcription-activation domain) protein 1 protein_coding Homo_sapiens

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