ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002900 Lamb1 10090 + 12:31265234-31329644 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002979 Lamb1-001 31265293-31329644 protein_coding
  ENSMUST00000164009 Lamb1-008 31278175-31278939 retained_intron
  ENSMUST00000164228 Lamb1-003 31265294-31268860 retained_intron
  ENSMUST00000164919 Lamb1-005 31265400-31329575 nonsense_mediated_decay
  ENSMUST00000169065 Lamb1-002 31276656-31287986 retained_intron
  ENSMUST00000169088 Lamb1-004 31265234-31329493 protein_coding
  ENSMUST00000170495 Lamb1-006 31265297-31266793 protein_coding
  ENSMUST00000172134 Lamb1-007 31323521-31324454 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000002979ENSMUST00000164919ENSMUST00000169088
Transcript ID C166 Tie2+ EC mES
ENSMUST00000002979 49.787±6.12 35.056±25.08 12.531±4.54
ENSMUST00000164919 N/A 4.854±0.00 N/A
ENSMUST00000169088 8.903±2.35 9.406±2.49 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008ZV CIL_0008ZV_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005178 IMP integrin binding
GO:0005201 ISS extracellular matrix structural constituent
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005604 IDA:ISS basement membrane
GO:0005605 IDA basal lamina
GO:0005606 IDA:ISS laminin-1 complex
GO:0005607 ISS laminin-2 complex
GO:0005615 IEA extracellular space
GO:0007155 IEA cell adhesion
GO:0007162 IDA negative regulation of cell adhesion
GO:0007566 IMP embryo implantation
GO:0007611 NAS learning or memory
GO:0016477 IMP cell migration
GO:0019899 IPI enzyme binding
GO:0021812 IEA neuronal-glial interaction involved in cerebral cortex radial glia guided migration
GO:0030335 ISS positive regulation of cell migration
GO:0031012 IEA extracellular matrix
GO:0031175 IDA:ISS neuron projection development
GO:0034446 IEA substrate adhesion-dependent cell spreading
GO:0035987 IEA endodermal cell differentiation
GO:0042476 ISS odontogenesis
GO:0043208 IDA glycosphingolipid binding
GO:0043256 IDA laminin complex
GO:0043257 ISS laminin-8 complex
GO:0043259 IPI:ISS laminin-10 complex
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045524 lamb1b protein_coding Danio_rerio
ENSG00000091136 LAMB1 laminin, beta 1 protein_coding Homo_sapiens

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