ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003411 Rab3b 10090 + 4:108879063-108943324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003502 Rab3b-003 108890290-108941188 protein_coding
  ENSMUST00000106650 Rab3b-001 108879063-108943324 protein_coding
  ENSMUST00000106651 Rab3b-002 108879200-108941185 protein_coding
  ENSMUST00000157062 Rab3b-004 108939100-108940905 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000003502ENSMUST00000106650ENSMUST00000106651ENSMUST00000157062
Transcript ID C166 Tie2+ EC mES
ENSMUST00000003502 3.121±2.06 0.402±0.22 4.926±3.83
ENSMUST00000106650 0.261±0.18 0.106±0.02 0.323±0.13
ENSMUST00000106651 0.465±0.00 N/A N/A
ENSMUST00000157062 N/A 0.738±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001W2 CIL_0001W2_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008021 IDA synaptic vesicle
GO:0015031 IEA protein transport
GO:0017157 IDA regulation of exocytosis
GO:0018125 IDA peptidyl-cysteine methylation
GO:0019003 IEA GDP binding
GO:0019882 IEA antigen processing and presentation
GO:0030141 IDA secretory granule
GO:0031489 IEA myosin V binding
GO:0031982 IEA vesicle
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051586 IEA positive regulation of dopamine uptake involved in synaptic transmission
GO:0070062 IEA extracellular vesicular exosome
GO:0097494 IEA regulation of vesicle size

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042803 rab3b protein_coding Danio_rerio
ENSG00000169213 RAB3B RAB3B, member RAS oncogene family protein_coding Homo_sapiens

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