ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000004113 Cacna1b 10090 - 2:24603887-24763152 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041342 Cacna1b-002 24606570-24763047 protein_coding
  ENSMUST00000070864 Cacna1b-001 24603887-24763152 protein_coding
  ENSMUST00000100348 Cacna1b-201 24606375-24763047 protein_coding
  ENSMUST00000102939 Cacna1b-004 24603894-24763129 protein_coding
  ENSMUST00000114447 Cacna1b-003 24606570-24763047 protein_coding
  ENSMUST00000124183 Cacna1b-005 24679500-24685868 protein_coding
  ENSMUST00000125798 Cacna1b-008 24609932-24637479 nonsense_mediated_decay
  ENSMUST00000131861 Cacna1b-006 24606379-24607534 protein_coding
  ENSMUST00000133892 Cacna1b-009 24607991-24618321 protein_coding
  ENSMUST00000155356 Cacna1b-007 24622599-24632024 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000041342ENSMUST00000070864ENSMUST00000100348ENSMUST00000102939ENSMUST00000114447ENSMUST00000124183ENSMUST00000131861
Transcript ID C166 Tie2+ EC mES
ENSMUST00000041342 0.004±0.00 0.016±0.00 0.055±0.00
ENSMUST00000070864 0.007±0.00 0.017±0.02 N/A
ENSMUST00000100348 0.001±0.00 N/A N/A
ENSMUST00000102939 N/A 0.058±0.00 0.114±0.00
ENSMUST00000114447 0.004±0.00 N/A N/A
ENSMUST00000124183 0.152±0.00 N/A N/A
ENSMUST00000131861 0.099±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000QH CIL_0000QH_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005245 IMP voltage-gated calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005891 IDA voltage-gated calcium channel complex
GO:0006816 IMP calcium ion transport
GO:0007269 IMP neurotransmitter secretion
GO:0007626 IMP locomotory behavior
GO:0008016 IMP regulation of heart contraction
GO:0008022 IEA protein C-terminus binding
GO:0008217 IMP regulation of blood pressure
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0016020 IDA membrane
GO:0030425 IDA dendrite
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IDA neuronal cell body
GO:0048265 IMP response to pain
GO:0051924 IMP regulation of calcium ion transport
GO:0070509 IBA calcium ion import
GO:0070588 IMP calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021735 cacna1ba protein_coding Danio_rerio
ENSDARG00000079295 cacna1bb protein_coding Danio_rerio
ENSG00000148408 CACNA1B calcium channel, voltage-dependent, N type, alpha 1B subunit protein_coding Homo_sapiens

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