ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005262 Ufd1l 10090 + 16:18811779-18835261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005394 Ufd1l-201 18812294-18835261 protein_coding
  ENSMUST00000115578 Ufd1l-001 18811832-18835256 protein_coding
  ENSMUST00000163695 Ufd1l-003 18812356-18825042 nonsense_mediated_decay
  ENSMUST00000164795 Ufd1l-004 18812294-18815910 processed_transcript
  ENSMUST00000166352 Ufd1l-005 18823226-18834254 retained_intron
  ENSMUST00000168822 Ufd1l-008 18811779-18815357 protein_coding
  ENSMUST00000170325 Ufd1l-007 18827249-18834404 retained_intron
  ENSMUST00000171789 Ufd1l-009 18812321-18827697 nonsense_mediated_decay
  ENSMUST00000172013 Ufd1l-002 18811824-18834310 nonsense_mediated_decay
  ENSMUST00000172451 Ufd1l-006 18827061-18828455 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000005394
Transcript ID C166 Tie2+ EC mES
ENSMUST00000005394 23.114±3.58 22.287±3.96 28.278±4.64

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00095F CIL_00095F_0002 VISTA
CIL_00099J CIL_00099J_0002 VISTA
CIL_0008BW CIL_0008BW_0002 VISTA
CIL_0000RN CIL_0000RN_0002 CGP
CIL_0006PK CIL_0006PK_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0032403 IEA protein complex binding
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010051 ufd1l protein_coding Danio_rerio
ENSG00000070010 UFD1L ubiquitin fusion degradation 1 like (yeast) protein_coding Homo_sapiens

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