ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005625 Psmd4 10090 - 3:95032694-95042614 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071664 Psmd4-001 95032697-95042552 protein_coding
  ENSMUST00000107237 Psmd4-002 95032694-95042614 protein_coding
  ENSMUST00000117355 Psmd4-004 95032705-95042543 protein_coding
  ENSMUST00000136868 Psmd4-005 95032923-95042545 retained_intron
  ENSMUST00000140280 Psmd4-003 95032705-95042548 retained_intron
  ENSMUST00000140348 Psmd4-008 95032704-95035267 protein_coding
  ENSMUST00000143688 Psmd4-007 95035823-95042550 processed_transcript
  ENSMUST00000147960 Psmd4-006 95032928-95033916 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000071664ENSMUST00000107237ENSMUST00000140348
Transcript ID C166 Tie2+ EC mES
ENSMUST00000071664 24.418±1.42 21.951±9.57 12.496±0.48
ENSMUST00000107237 32.642±2.26 24.959±13.80 41.773±5.73
ENSMUST00000140348 N/A 19.691±11.44 40.611±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008540 IEA proteasome regulatory particle, base subcomplex
GO:0022624 IDA proteasome accessory complex
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023279 psmd4b protein_coding Danio_rerio
ENSG00000159352 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 protein_coding Homo_sapiens

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