ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006301 Tmbim1 10090 - 1:74288247-74305622 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016309 Tmbim1-001 74288247-74304405 protein_coding
  ENSMUST00000113796 Tmbim1-002 74288253-74304361 protein_coding
  ENSMUST00000128505 Tmbim1-008 74289300-74291228 protein_coding
  ENSMUST00000130763 Tmbim1-006 74293910-74305622 protein_coding
  ENSMUST00000135384 Tmbim1-003 74288251-74304351 retained_intron
  ENSMUST00000141560 Tmbim1-005 74293927-74304120 protein_coding
  ENSMUST00000152603 Tmbim1-004 74288251-74295695 retained_intron
  ENSMUST00000154859 Tmbim1-007 74293562-74304215 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000016309
Transcript ID C166 Tie2+ EC mES
ENSMUST00000016309 37.794±8.03 34.184±26.85 15.615±7.58

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007WL CIL_0007WL_0002 VISTA
CIL_0005VJ CIL_0005VJ_0002 CGP
CIL_0005VI CIL_0005VI_0002 CGP
CIL_0005VH CIL_0005VH_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005123 IEA death receptor binding
GO:0005765 IEA lysosomal membrane
GO:0005794 IEA Golgi apparatus
GO:0010008 IEA endosome membrane
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome
GO:0090005 IEA negative regulation of establishment of protein localization to plasma membrane
GO:1902042 IEA negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:1902045 IEA negative regulation of Fas signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058323 tmbim1 protein_coding Danio_rerio
ENSDARG00000090534 TMBIM1 (2 of 2) protein_coding Danio_rerio
ENSG00000135926 TMBIM1 transmembrane BAX inhibitor motif containing 1 protein_coding Homo_sapiens

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