ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007122 Casq1 10090 - 1:172209894-172219868 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003554 Casq1-001 172209894-172219868 protein_coding
  ENSMUST00000170638 Casq1-002 172209895-172213955 retained_intron
  ENSMUST00000170700 Casq1-003 172215140-172219715 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000003554ENSMUST00000170638ENSMUST00000170700
Transcript ID C166 Tie2+ EC mES
ENSMUST00000003554 0.071±0.02 0.221±0.00 N/A
ENSMUST00000170638 0.046±0.02 0.852±0.77 0.467±0.11
ENSMUST00000170700 0.132±0.04 N/A N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0005794 IEA Golgi apparatus
GO:0006937 TAS regulation of muscle contraction
GO:0007029 IMP endoplasmic reticulum organization
GO:0007519 IEA skeletal muscle tissue development
GO:0009408 IMP response to heat
GO:0010033 IEA response to organic substance
GO:0010880 IDA regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0014802 IEA terminal cisterna
GO:0014804 IEA terminal cisterna lumen
GO:0014809 IMP regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion
GO:0014870 IEA response to muscle inactivity
GO:0014894 IEA response to denervation involved in regulation of muscle adaptation
GO:0016529 TAS sarcoplasmic reticulum
GO:0030016 IEA myofibril
GO:0030315 IEA T-tubule
GO:0031674 IEA I band
GO:0033018 IDA sarcoplasmic reticulum lumen
GO:0042383 IEA sarcolemma
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045214 IMP sarcomere organization
GO:0051258 ISS protein polymerization
GO:0051282 IEA regulation of sequestering of calcium ion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018105 casq1b protein_coding Danio_rerio
ENSDARG00000038716 casq1a protein_coding Danio_rerio
ENSG00000143318 CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle) protein_coding Homo_sapiens

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