ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000008435 Rdh13 10090 - 7:4424770-4445649 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000008579 Rdh13-001 4425667-4445649 protein_coding
  ENSMUST00000119485 Rdh13-002 4424770-4445601 protein_coding
  ENSMUST00000128299 Rdh13-004 4443737-4445642 processed_transcript
  ENSMUST00000138798 Rdh13-006 4435033-4445181 protein_coding
  ENSMUST00000147599 Rdh13-003 4440407-4445593 retained_intron
  ENSMUST00000154033 Rdh13-005 4444202-4445626 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000008579
Transcript ID C166 Tie2+ EC mES
ENSMUST00000008579 5.186±1.06 1.272±0.40 3.153±0.40

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005LZ CIL_0005LZ_0002 CGP
CIL_00068Q CIL_00068Q_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0009644 IMP response to high light intensity
GO:0010842 IMP retina layer formation
GO:0016491 IEA oxidoreductase activity
GO:0042462 IMP eye photoreceptor cell development
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008491 RDH13 (1 of 3) protein_coding Danio_rerio
ENSDARG00000034577 RDH13 (2 of 3) protein_coding Danio_rerio
ENSDARG00000054797 RDH13 (3 of 3) protein_coding Danio_rerio
ENSG00000160439 RDH13 retinol dehydrogenase 13 (all-trans/9-cis) protein_coding Homo_sapiens

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