ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000011257 Pabpc4 10090 + 4:123262351-123298925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078734 Pabpc4-002 123283095-123298832 protein_coding
  ENSMUST00000080178 Pabpc4-001 123282911-123298832 protein_coding
  ENSMUST00000106241 Pabpc4-004 123282832-123298832 protein_coding
  ENSMUST00000106243 Pabpc4-003 123282825-123298925 protein_coding
  ENSMUST00000124991 Pabpc4-006 123294964-123298006 processed_transcript
  ENSMUST00000146156 Pabpc4-007 123297180-123298832 retained_intron
  ENSMUST00000156807 Pabpc4-008 123262351-123286762 processed_transcript
  ENSMUST00000183940 Pabpc4-005 123282845-123298822 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000078734ENSMUST00000080178ENSMUST00000106241ENSMUST00000106243ENSMUST00000124991ENSMUST00000146156ENSMUST00000183940
Transcript ID C166 Tie2+ EC mES
ENSMUST00000078734 N/A 3.314±2.62 N/A
ENSMUST00000080178 35.358±3.80 5.715±4.51 N/A
ENSMUST00000106241 9.175±0.12 N/A N/A
ENSMUST00000106243 8.493±0.25 5.241±1.46 12.546±3.67
ENSMUST00000124991 N/A 9.827±0.00 N/A
ENSMUST00000146156 N/A N/A 25.301±0.00
ENSMUST00000183940 N/A 2.602±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059259 pabpc4 protein_coding Danio_rerio
ENSG00000090621 PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) protein_coding Homo_sapiens

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