ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015843 Rxrg 10090 + 1:167598384-167639623 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015987 Rxrg-001 167598384-167639623 protein_coding
  ENSMUST00000111380 Rxrg-004 167618309-167639621 protein_coding
  ENSMUST00000111384 Rxrg-003 167598480-167639618 protein_coding
  ENSMUST00000111386 Rxrg-002 167598460-167639424 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000015987ENSMUST00000111380ENSMUST00000111384ENSMUST00000111386
Transcript ID Tie2+ EC mES
ENSMUST00000015987 0.008±0.00 0.158±0.00
ENSMUST00000111380 0.065±0.00 0.100±0.03
ENSMUST00000111384 0.108±0.06 0.250±0.00
ENSMUST00000111386 0.050±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005MM CIL_0005MM_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003707 IEA steroid hormone receptor activity
GO:0004886 IDA 9-cis retinoic acid receptor activity
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0007422 IEA peripheral nervous system development
GO:0007507 IEA heart development
GO:0007519 IEA skeletal muscle tissue development
GO:0008270 IEA zinc ion binding
GO:0014070 IEA response to organic cyclic compound
GO:0030182 IEA neuron differentiation
GO:0031641 IEA regulation of myelination
GO:0032526 IEA response to retinoic acid
GO:0032870 IEA cellular response to hormone stimulus
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IGI sequence-specific DNA binding
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0048384 IDA retinoic acid receptor signaling pathway
GO:0051289 IDA protein homotetramerization
GO:1901522 IDA positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004697 rxrgb protein_coding Danio_rerio
ENSG00000143171 RXRG retinoid X receptor, gamma protein_coding Homo_sapiens

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