ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015950 Ncf1 10090 - 5:134220053-134229625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016094 Ncf1-002 134220260-134229625 protein_coding
  ENSMUST00000111275 Ncf1-001 134220260-134229625 protein_coding
  ENSMUST00000126934 Ncf1-006 134225717-134227810 retained_intron
  ENSMUST00000139249 Ncf1-005 134223445-134228399 retained_intron
  ENSMUST00000144086 Ncf1-003 134220260-134229625 protein_coding
  ENSMUST00000146354 Ncf1-004 134220053-134229625 nonsense_mediated_decay
  ENSMUST00000182626 Ncf1-007 134221372-134222222 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000111275
Transcript ID Tie2+ EC mES
ENSMUST00000111275 0.529±0.00 0.163±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00051K CIL_00051K_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001878 IMP response to yeast
GO:0001909 IMP leukocyte mediated cytotoxicity
GO:0002679 IMP respiratory burst involved in defense response
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005791 IEA rough endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 ISA cytosol
GO:0005886 IEA plasma membrane
GO:0006612 IEA protein targeting to membrane
GO:0006691 IMP leukotriene metabolic process
GO:0006742 ISA NADP catabolic process
GO:0006915 IEA apoptotic process
GO:0006954 IMP inflammatory response
GO:0006968 IMP cellular defense response
GO:0008283 IMP cell proliferation
GO:0009617 IMP response to bacterium
GO:0016020 IEA membrane
GO:0016175 ISA superoxide-generating NADPH oxidase activity
GO:0017124 IEA SH3 domain binding
GO:0019898 IEA extrinsic component of membrane
GO:0030425 IEA dendrite
GO:0035091 ISS phosphatidylinositol binding
GO:0042554 IMP superoxide anion generation
GO:0042742 IMP defense response to bacterium
GO:0043020 IEA NADPH oxidase complex
GO:0043025 IEA neuronal cell body
GO:0043325 IEA phosphatidylinositol-3,4-bisphosphate binding
GO:0045730 IMP respiratory burst
GO:0045986 IMP negative regulation of smooth muscle contraction
GO:0050665 IMP hydrogen peroxide biosynthetic process
GO:0050830 IMP defense response to Gram-positive bacterium
GO:0050832 IMP defense response to fungus
GO:0055114 IEA oxidation-reduction process
GO:0070946 IMP neutrophil mediated killing of gram-positive bacterium
GO:0070947 IMP neutrophil mediated killing of fungus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033735 ncf1 protein_coding Danio_rerio
ENSG00000158517 NCF1 neutrophil cytosolic factor 1 protein_coding Homo_sapiens

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