ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016487 Ppfibp1 10090 + 6:146888487-147032025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016631 Ppfibp1-001 146888487-147032025 protein_coding
  ENSMUST00000111623 Ppfibp1-002 146888589-147032025 protein_coding
  ENSMUST00000123902 Ppfibp1-004 146999545-147032023 retained_intron
  ENSMUST00000126774 Ppfibp1-007 146996442-147002249 processed_transcript
  ENSMUST00000133825 Ppfibp1-008 147001694-147005995 retained_intron
  ENSMUST00000136837 Ppfibp1-010 147010879-147019580 protein_coding
  ENSMUST00000149203 Ppfibp1-005 147000315-147017445 retained_intron
  ENSMUST00000154221 Ppfibp1-006 146992480-147005967 protein_coding
  ENSMUST00000155415 Ppfibp1-009 147002243-147019173 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000016631ENSMUST00000111623
Transcript ID C166 Tie2+ EC mES
ENSMUST00000016631 46.078±3.15 10.888±4.94 10.451±6.23
ENSMUST00000111623 69.331±4.59 26.597±8.14 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00056H CIL_00056H_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005925 IEA focal adhesion
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045749 PPFIBP1 (1 of 2) protein_coding Danio_rerio
ENSG00000110841 PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) protein_coding Homo_sapiens

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