ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018417 Myo1b 10090 - 1:51749765-51916071 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018561 Myo1b-002 51749994-51915928 protein_coding
  ENSMUST00000046390 Myo1b-001 51749765-51916071 protein_coding
  ENSMUST00000114537 Myo1b-003 51749982-51915941 protein_coding
  ENSMUST00000114541 Myo1b-013 51749989-51907316 protein_coding
  ENSMUST00000123299 Myo1b-015 51834464-51851106 processed_transcript
  ENSMUST00000126657 Myo1b-005 51862645-51915921 retained_intron
  ENSMUST00000126952 Myo1b-009 51779715-51782204 retained_intron
  ENSMUST00000135125 Myo1b-007 51799536-51820546 processed_transcript
  ENSMUST00000136273 Myo1b-014 51766876-51776436 processed_transcript
  ENSMUST00000136701 Myo1b-008 51776393-51795225 processed_transcript
  ENSMUST00000140731 Myo1b-010 51762522-51770879 processed_transcript
  ENSMUST00000140930 Myo1b-011 51762590-51767392 retained_intron
  ENSMUST00000144694 Myo1b-006 51797403-51896301 protein_coding
  ENSMUST00000145367 Myo1b-012 51760353-51764470 retained_intron
  ENSMUST00000151525 Myo1b-004 51810681-51915912 retained_intron

Mus musculus Ensembl GRCm38

Genome
Exciting message
Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000018561ENSMUST00000046390ENSMUST00000114537ENSMUST00000151525
Transcript ID C166 Tie2+ EC mES
ENSMUST00000018561 5.940±1.01 17.117±11.57 5.688±3.67
ENSMUST00000046390 5.016±0.60 24.987±22.13 7.141±1.96
ENSMUST00000114537 4.291±1.02 17.980±12.56 N/A
ENSMUST00000151525 N/A 3.632±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 ISS microfilament motor activity
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 ISS phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 ISS cytoplasm
GO:0005769 IEA early endosome
GO:0005884 IEA actin filament
GO:0005886 ISS plasma membrane
GO:0005903 ISS brush border
GO:0006892 IEA post-Golgi vesicle-mediated transport
GO:0007015 IEA actin filament organization
GO:0008152 IEA metabolic process
GO:0010008 IEA endosome membrane
GO:0016459 IEA myosin complex
GO:0030048 ISS actin filament-based movement
GO:0030175 ISS filopodium
GO:0032588 IEA trans-Golgi network membrane
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051015 IEA actin filament binding
GO:0051017 ISS actin filament bundle assembly
GO:0070062 IEA extracellular vesicular exosome
GO:0071944 ISS cell periphery

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024694 myo1b protein_coding Danio_rerio
ENSG00000128641 MYO1B myosin IB protein_coding Homo_sapiens

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