ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019188 H13 10090 + 2:152669461-152708670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079247 H13-003 152669534-152704128 protein_coding
  ENSMUST00000089059 H13-002 152669488-152705036 protein_coding
  ENSMUST00000109825 H13-006 152669488-152686701 protein_coding
  ENSMUST00000125366 H13-001 152669461-152708670 protein_coding
  ENSMUST00000129439 H13-004 152691839-152696241 retained_intron
  ENSMUST00000148156 H13-005 152669486-152683441 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000089059ENSMUST00000125366ENSMUST00000148156
Transcript ID C166 Tie2+ EC mES
ENSMUST00000089059 47.782±4.16 17.916±5.20 31.593±4.47
ENSMUST00000125366 5.019±0.94 2.571±1.92 4.777±0.18
ENSMUST00000148156 4.596±0.88 1.858±0.17 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00096R CIL_00096R_0002 VISTA
CIL_0008K5 CIL_0008K5_0002 VISTA
CIL_00089Z CIL_00089Z_0002 VISTA
CIL_0008N4 CIL_0008N4_0002 VISTA
CIL_0001A0 CIL_0001A0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005791 IEA rough endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0008233 ISS peptidase activity
GO:0009986 IDA cell surface
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0033619 ISS membrane protein proteolysis
GO:0042500 IEA aspartic endopeptidase activity, intramembrane cleaving
GO:0042803 ISS protein homodimerization activity
GO:0071458 ISS integral component of cytoplasmic side of endoplasmic reticulum membrane
GO:0071556 ISS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037846 hm13 protein_coding Danio_rerio
ENSG00000101294 HM13 histocompatibility (minor) 13 protein_coding Homo_sapiens

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