ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020929 Eftud2 10090 - 11:102838473-102880985 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021306 Eftud2-002 102838473-102880967 protein_coding
  ENSMUST00000107060 Eftud2-001 102838473-102880985 protein_coding
  ENSMUST00000123833 Eftud2-003 102865862-102880964 retained_intron
  ENSMUST00000131678 Eftud2-006 102849194-102860221 retained_intron
  ENSMUST00000132543 Eftud2-008 102838838-102841238 nonsense_mediated_decay
  ENSMUST00000138483 Eftud2-010 102862611-102877690 nonsense_mediated_decay
  ENSMUST00000141273 Eftud2-007 102840211-102847979 retained_intron
  ENSMUST00000143323 Eftud2-009 102839450-102840675 retained_intron
  ENSMUST00000147368 Eftud2-005 102869935-102877715 retained_intron
  ENSMUST00000148209 Eftud2-004 102876964-102880935 retained_intron
  ENSMUST00000172611 Eftud2-013 102838477-102844218 protein_coding
  ENSMUST00000173679 Eftud2-012 102838801-102877714 protein_coding
  ENSMUST00000173974 Eftud2-011 102863865-102865969 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000021306ENSMUST00000107060ENSMUST00000147368ENSMUST00000172611
Transcript ID C166 Tie2+ EC mES
ENSMUST00000021306 5.358±0.45 3.642±0.91 N/A
ENSMUST00000107060 38.398±3.51 19.466±9.67 17.175±4.73
ENSMUST00000147368 N/A 59.757±0.00 N/A
ENSMUST00000172611 N/A N/A 105.296±28.55

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007ST CIL_0007ST_0002 VISTA
CIL_0006U5 CIL_0006U5_0002 CGP
CIL_0006UA CIL_0006UA_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0006397 IEA mRNA processing
GO:0006414 IEA translational elongation
GO:0008380 IEA RNA splicing
GO:0015030 IEA Cajal body
GO:0016020 IEA membrane
GO:0016607 IEA nuclear speck
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012261 eftud2 protein_coding Danio_rerio
ENSG00000108883 EFTUD2 elongation factor Tu GTP binding domain containing 2 protein_coding Homo_sapiens

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