ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021244 Ylpm1 10090 + 12:84996321-85070515 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021670 Ylpm1-001 84996352-85070515 protein_coding
  ENSMUST00000101202 Ylpm1-201 84996490-85070514 protein_coding
  ENSMUST00000164558 Ylpm1-002 85014701-85070492 nonsense_mediated_decay
  ENSMUST00000165803 Ylpm1-007 85049690-85050621 retained_intron
  ENSMUST00000166605 Ylpm1-005 85064679-85070415 retained_intron
  ENSMUST00000167838 Ylpm1-006 85059960-85070249 retained_intron
  ENSMUST00000168977 Ylpm1-004 84996321-85070492 protein_coding
  ENSMUST00000169150 Ylpm1-003 85042227-85059336 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000021670ENSMUST00000101202ENSMUST00000164558ENSMUST00000168977
Transcript ID C166 Tie2+ EC mES
ENSMUST00000021670 8.133±1.83 4.377±3.05 9.557±2.14
ENSMUST00000101202 N/A 3.271±0.00 6.259±0.00
ENSMUST00000164558 2.087±0.00 1.068±0.00 N/A
ENSMUST00000168977 2.186±0.27 1.325±0.18 6.587±2.18

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005AX CIL_0005AX_0002 CGP
CIL_0003U2 CIL_0003U2_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0032204 IDA regulation of telomere maintenance
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043680 ylpm1 protein_coding Danio_rerio
ENSG00000119596 YLPM1 YLP motif containing 1 protein_coding Homo_sapiens

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