ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021327 Zkscan3 10090 - 13:21387013-21402755 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070785 Zkscan3-003 21387013-21402713 protein_coding
  ENSMUST00000116433 Zkscan3-002 21393232-21402716 protein_coding
  ENSMUST00000116434 Zkscan3-001 21387013-21402755 protein_coding
  ENSMUST00000117721 Zkscan3-004 21389293-21402695 protein_coding
  ENSMUST00000145631 Zkscan3-006 21388605-21394763 protein_coding
  ENSMUST00000151467 Zkscan3-005 21401549-21402670 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000070785ENSMUST00000116434ENSMUST00000117721
Transcript ID C166 Tie2+ EC mES
ENSMUST00000070785 8.783±1.73 4.503±1.30 5.760±2.22
ENSMUST00000116434 7.408±0.81 3.944±0.74 2.956±0.29
ENSMUST00000117721 2.303±0.51 1.685±0.00 0.828±0.06

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 ISS DNA binding
GO:0003682 ISS chromatin binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006914 IEA autophagy
GO:0007040 ISS lysosome organization
GO:0010507 ISS negative regulation of autophagy
GO:0043565 ISS sequence-specific DNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:2000773 ISS negative regulation of cellular senescence

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189298 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 protein_coding Homo_sapiens

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