ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021770 Samd8 10090 + 14:21750531-21798725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022292 Samd8-001 21750531-21793302 protein_coding
  ENSMUST00000119430 Samd8-003 21751552-21798725 protein_coding
  ENSMUST00000142023 Samd8-004 21791872-21792975 retained_intron
  ENSMUST00000144061 Samd8-002 21750548-21793302 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000119430ENSMUST00000144061
Transcript ID C166 Tie2+ EC mES
ENSMUST00000119430 9.608±3.13 1.988±0.31 N/A
ENSMUST00000144061 6.314±0.49 1.147±0.04 2.557±0.13

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00082Q CIL_00082Q_0002 VISTA
CIL_0007JX CIL_0007JX_0002 UCNEbase
CIL_0008UO CIL_0008UO_0002 VISTA
CIL_000925 CIL_000925_0002 VISTA
CIL_00084B CIL_00084B_0002 VISTA
CIL_0006DL CIL_0006DL_0003 CGP
CIL_0008K8 CIL_0008K8_0002 VISTA
CIL_0007IJ CIL_0007IJ_0002 CGP
CIL_0007IK CIL_0007IK_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006686 NAS sphingomyelin biosynthetic process
GO:0016021 NAS integral component of membrane
GO:0016740 IEA transferase activity
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0046513 ISS ceramide biosynthetic process
GO:2000303 ISS regulation of ceramide biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000156671 SAMD8 sterile alpha motif domain containing 8 protein_coding Homo_sapiens

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