ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022485 Hoxc5 10090 + 15:102967443-103017429 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001709 Hoxc5-001 103013815-103017429 protein_coding
  ENSMUST00000174869 Hoxc5-002 102967443-103015676 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000001709
Transcript ID Tie2+ EC mES
ENSMUST00000001709 0.005±0.00 0.180±0.14

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009B4 CIL_0009B4_0002 VISTA
CIL_0007SU CIL_0007SU_0002 VISTA
CIL_00084M CIL_00084M_0002 VISTA
CIL_00003G CIL_00003G_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009952 IGI anterior/posterior pattern specification
GO:0030054 IEA cell junction
GO:0043565 IEA sequence-specific DNA binding
GO:0048706 IGI embryonic skeletal system development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070340 hoxc5a protein_coding Danio_rerio
ENSG00000172789 HOXC5 homeobox C5 protein_coding Homo_sapiens

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