ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022702 Hira 10090 + 16:18877037-18970309 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004222 Hira-001 18877066-18970309 protein_coding
  ENSMUST00000120532 Hira-002 18877037-18928030 protein_coding
  ENSMUST00000128321 Hira-004 18877412-18916586 retained_intron
  ENSMUST00000131444 Hira-006 18925577-18935135 retained_intron
  ENSMUST00000140748 Hira-009 18923073-18925657 processed_transcript
  ENSMUST00000144609 Hira-005 18877270-18910743 retained_intron
  ENSMUST00000150799 Hira-008 18933013-18947518 processed_transcript
  ENSMUST00000153397 Hira-003 18877270-18935080 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000004222ENSMUST00000120532ENSMUST00000153397
Transcript ID C166 Tie2+ EC mES
ENSMUST00000004222 7.847±1.59 7.214±1.65 3.914±0.04
ENSMUST00000120532 8.142±1.28 3.419±0.47 2.442±0.36
ENSMUST00000153397 N/A 6.839±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00099J CIL_00099J_0002 VISTA
CIL_0008BW CIL_0008BW_0002 VISTA
CIL_0005F0 CIL_0005F0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001649 IGI osteoblast differentiation
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0006336 IEA DNA replication-independent nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007369 IMP gastrulation
GO:0016568 IEA chromatin modification
GO:0042692 IGI muscle cell differentiation
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013434 hira protein_coding Danio_rerio
ENSG00000100084 HIRA histone cell cycle regulator protein_coding Homo_sapiens

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