ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024120 Lrpprc 10090 - 17:84705247-84790789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000112308 Lrpprc-001 84705247-84790558 protein_coding
  ENSMUST00000159222 Lrpprc-004 84770437-84777543 processed_transcript
  ENSMUST00000160011 Lrpprc-006 84731180-84751262 nonsense_mediated_decay
  ENSMUST00000160414 Lrpprc-005 84748781-84751262 retained_intron
  ENSMUST00000161299 Lrpprc-003 84767589-84790562 retained_intron
  ENSMUST00000161928 Lrpprc-002 84766428-84790789 retained_intron
  ENSMUST00000162799 Lrpprc-007 84712784-84731184 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000112308
Transcript ID C166 Tie2+ EC mES
ENSMUST00000112308 18.747±2.01 7.697±5.80 7.622±0.95

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001XN CIL_0001XN_0002 CGP
CIL_0001XM CIL_0001XM_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000794 ISS condensed nuclear chromosome
GO:0000961 IMP negative regulation of mitochondrial RNA catabolic process
GO:0003697 IDA single-stranded DNA binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005856 ISS cytoskeleton
GO:0005874 IEA microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016020 IEA membrane
GO:0030529 IDA ribonucleoprotein complex
GO:0042645 IEA mitochondrial nucleoid
GO:0044822 IEA poly(A) RNA binding
GO:0048471 ISS perinuclear region of cytoplasm
GO:0048487 ISS beta-tubulin binding
GO:0051028 IEA mRNA transport
GO:0070129 IMP regulation of mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043970 lrpprc protein_coding Danio_rerio
ENSG00000138095 LRPPRC leucine-rich pentatricopeptide repeat containing protein_coding Homo_sapiens

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