ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025159 Mms19 10090 - 19:41941086-41981157 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026168 Mms19-009 41944377-41981132 protein_coding
  ENSMUST00000163287 Mms19-011 41944209-41969722 protein_coding
  ENSMUST00000163398 Mms19-010 41944211-41981117 nonsense_mediated_decay
  ENSMUST00000164776 Mms19-004 41944211-41981136 nonsense_mediated_decay
  ENSMUST00000165043 Mms19-017 41947165-41948232 retained_intron
  ENSMUST00000166090 Mms19-012 41944489-41955138 nonsense_mediated_decay
  ENSMUST00000166517 Mms19-016 41949727-41951344 retained_intron
  ENSMUST00000167820 Mms19-015 41946980-41953944 protein_coding
  ENSMUST00000167927 Mms19-006 41941086-41981114 nonsense_mediated_decay
  ENSMUST00000168484 Mms19-005 41953097-41981130 nonsense_mediated_decay
  ENSMUST00000168737 Mms19-014 41954457-41955167 retained_intron
  ENSMUST00000169765 Mms19-008 41962988-41969741 protein_coding
  ENSMUST00000169775 Mms19-003 41947675-41981137 nonsense_mediated_decay
  ENSMUST00000169779 Mms19-018 41944549-41945627 retained_intron
  ENSMUST00000169933 Mms19-013 41962780-41963107 retained_intron
  ENSMUST00000170209 Mms19-007 41944205-41964627 retained_intron
  ENSMUST00000171561 Mms19-001 41941086-41981157 protein_coding
  ENSMUST00000171755 Mms19-002 41946792-41981139 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000026168ENSMUST00000163287ENSMUST00000163398ENSMUST00000164776ENSMUST00000167927ENSMUST00000171561
Transcript ID C166 Tie2+ EC mES
ENSMUST00000026168 9.446±0.81 N/A N/A
ENSMUST00000163287 N/A N/A 5.119±0.85
ENSMUST00000163398 8.658±1.37 N/A 4.514±0.28
ENSMUST00000164776 10.678±2.14 5.316±0.54 N/A
ENSMUST00000167927 2.812±0.00 2.071±0.45 1.675±0.39
ENSMUST00000171561 5.040±0.77 2.528±0.00 3.755±0.16

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005Y0 CIL_0005Y0_0002 CGP
CIL_0005Y1 CIL_0005Y1_0002 CGP
CIL_0004VE CIL_0004VE_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 IEA transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005819 ISS spindle
GO:0006259 ISS DNA metabolic process
GO:0006281 ISS DNA repair
GO:0006351 IEA transcription, DNA-templated
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007059 ISS chromosome segregation
GO:0016020 IEA membrane
GO:0016226 ISS iron-sulfur cluster assembly
GO:0030331 IEA estrogen receptor binding
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0071817 ISS MMXD complex
GO:0097361 ISS CIA complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079067 mms19 protein_coding Danio_rerio
ENSG00000155229 MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae) protein_coding Homo_sapiens

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