ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025724 Sec11a 10090 - 7:80904889-80947780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026818 Sec11a-001 80915377-80947780 protein_coding
  ENSMUST00000117383 Sec11a-003 80915661-80947780 protein_coding
  ENSMUST00000119980 Sec11a-006 80916089-80947780 protein_coding
  ENSMUST00000120285 Sec11a-010 80907716-80947513 protein_coding
  ENSMUST00000130981 Sec11a-005 80915377-80923558 retained_intron
  ENSMUST00000136556 Sec11a-002 80920895-80947742 retained_intron
  ENSMUST00000147813 Sec11a-009 80904889-80947545 processed_transcript
  ENSMUST00000147881 Sec11a-008 80915763-80947511 processed_transcript
  ENSMUST00000150049 Sec11a-004 80915377-80925650 processed_transcript
  ENSMUST00000153053 Sec11a-007 80915566-80916330 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000026818ENSMUST00000147881ENSMUST00000150049ENSMUST00000153053
Transcript ID C166 Tie2+ EC mES
ENSMUST00000026818 55.055±2.77 65.399±2.86 50.295±9.74
ENSMUST00000147881 35.049±5.58 25.790±4.45 N/A
ENSMUST00000150049 N/A 40.946±10.24 22.031±8.24
ENSMUST00000153053 N/A 54.097±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008FE CIL_0008FE_0002 VISTA
CIL_0000N2 CIL_0000N2_0002 CGP
CIL_0003XQ CIL_0003XQ_0003 CGP
CIL_0003XP CIL_0003XP_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008236 IEA serine-type peptidase activity
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008936 sec11a protein_coding Danio_rerio
ENSG00000140612 SEC11A SEC11 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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