ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026005 Rpe 10090 + 1:66700831-66719805 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027157 Rpe-001 66700831-66719805 protein_coding
  ENSMUST00000113995 Rpe-002 66700831-66719805 protein_coding
  ENSMUST00000142920 Rpe-003 66700831-66719805 nonsense_mediated_decay
  ENSMUST00000151016 Rpe-004 66700831-66715194 nonsense_mediated_decay
  ENSMUST00000190404 Rpe-005 66700907-66718019 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027157ENSMUST00000190404
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027157 24.364±2.69 7.298±1.86 3.792±0.89
ENSMUST00000190404 N/A 5.255±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006P1 CIL_0006P1_0002 CGP
CIL_0006P6 CIL_0006P6_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004750 ISS ribulose-phosphate 3-epimerase activity
GO:0005975 ISS carbohydrate metabolic process
GO:0006098 ISS pentose-phosphate shunt
GO:0009052 IEA pentose-phosphate shunt, non-oxidative branch
GO:0016857 IEA racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0030246 IEA carbohydrate binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046872 ISS metal ion binding
GO:0048029 IEA monosaccharide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005251 rpe protein_coding Danio_rerio
ENSG00000197713 RPE ribulose-5-phosphate-3-epimerase protein_coding Homo_sapiens
ENSG00000235376 RPEL1 ribulose-5-phosphate-3-epimerase-like 1 protein_coding Homo_sapiens

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