ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026014 Raph1 10090 - 1:60482292-60567104 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027168 Raph1-201 60483236-60566765 protein_coding
  ENSMUST00000090293 Raph1-003 60490676-60566769 protein_coding
  ENSMUST00000127573 Raph1-007 60513809-60522291 retained_intron
  ENSMUST00000140485 Raph1-001 60482292-60566779 protein_coding
  ENSMUST00000142258 Raph1-004 60525688-60567104 protein_coding
  ENSMUST00000182085 Raph1-005 60483185-60499550 protein_coding
  ENSMUST00000188511 Raph1-002 60493323-60496281 retained_intron
  ENSMUST00000189383 Raph1-006 60501603-60503265 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027168ENSMUST00000127573ENSMUST00000140485ENSMUST00000182085
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027168 N/A N/A 7.084±0.00
ENSMUST00000127573 N/A 3.596±1.23 N/A
ENSMUST00000140485 32.699±7.12 7.509±3.40 2.360±0.66
ENSMUST00000182085 N/A 49.279±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000JQ CIL_0000JQ_0003 CGP
CIL_0001QX CIL_0001QX_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007165 IEA signal transduction
GO:0031252 IDA cell leading edge
GO:0048675 IMP axon extension

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006301 raph1a protein_coding Danio_rerio
ENSDARG00000061732 raph1b protein_coding Danio_rerio
ENSG00000173166 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 protein_coding Homo_sapiens

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