ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026126 Ptpn18 10090 + 1:34459762-34475733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027302 Ptpn18-002 34459765-34473784 protein_coding
  ENSMUST00000185610 Ptpn18-006 34459762-34461056 retained_intron
  ENSMUST00000186252 Ptpn18-007 34463271-34466866 retained_intron
  ENSMUST00000188019 Ptpn18-008 34474499-34475733 processed_transcript
  ENSMUST00000188884 Ptpn18-005 34459792-34471916 retained_intron
  ENSMUST00000188972 Ptpn18-001 34472720-34475733 protein_coding
  ENSMUST00000190122 Ptpn18-004 34459777-34471917 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000027302ENSMUST00000186252ENSMUST00000188972
Transcript ID C166 Tie2+ EC mES
ENSMUST00000027302 0.050±0.02 3.598±0.77 44.151±29.75
ENSMUST00000186252 0.012±0.00 N/A N/A
ENSMUST00000188972 0.256±0.07 5.481±0.00 42.429±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001J6 CIL_0001J6_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004726 IDA non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006308 ptpn18 protein_coding Danio_rerio
ENSG00000072135 PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) protein_coding Homo_sapiens

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