ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026751 Nr5a1 10090 - 2:38692656-38714542 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028084 Nr5a1-003 38692660-38714542 protein_coding
  ENSMUST00000112883 Nr5a1-001 38692656-38712234 protein_coding
  ENSMUST00000149690 Nr5a1-002 38701322-38711188 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028084ENSMUST00000112883ENSMUST00000149690
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028084 0.014±0.01 0.080±0.00 N/A
ENSMUST00000112883 0.001±0.00 0.095±0.04 0.018±0.00
ENSMUST00000149690 0.012±0.00 N/A 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008N3 CIL_0008N3_0002 VISTA
CIL_00098L CIL_00098L_0002 VISTA
CIL_00075I CIL_00075I_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001553 IMP luteinization
GO:0003677 IDA DNA binding
GO:0003682 IDA chromatin binding
GO:0003690 IEA double-stranded DNA binding
GO:0003705 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005543 IEA phospholipid binding
GO:0005634 IDA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0008584 IMP male gonad development
GO:0008585 IEA female gonad development
GO:0009888 IMP tissue development
GO:0010259 IMP multicellular organismal aging
GO:0019899 IEA enzyme binding
GO:0022414 IMP reproductive process
GO:0030154 IGI cell differentiation
GO:0030325 IGI adrenal gland development
GO:0042445 IMP hormone metabolic process
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051457 IDA maintenance of protein location in nucleus
GO:2000020 IMP positive regulation of male gonad development
GO:2000195 IMP negative regulation of female gonad development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023362 nr5a1b protein_coding Danio_rerio
ENSG00000136931 NR5A1 nuclear receptor subfamily 5, group A, member 1 protein_coding Homo_sapiens

Loading