ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026771 Spopl 10090 - 2:23506220-23572106 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028110 Spopl-005 23510672-23572078 nonsense_mediated_decay
  ENSMUST00000123843 Spopl-003 23543243-23572106 nonsense_mediated_decay
  ENSMUST00000132484 Spopl-001 23506220-23572104 protein_coding
  ENSMUST00000132827 Spopl-002 23511270-23571978 nonsense_mediated_decay
  ENSMUST00000136290 Spopl-004 23517803-23537500 retained_intron
  ENSMUST00000195415 Spopl-006 23511534-23515223 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028110ENSMUST00000132484ENSMUST00000132827ENSMUST00000195415
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028110 4.799±0.42 2.671±0.00 1.341±0.00
ENSMUST00000132484 5.157±1.06 2.358±1.06 0.926±0.01
ENSMUST00000132827 N/A N/A 3.287±0.00
ENSMUST00000195415 N/A 1.733±0.62 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000QJ CIL_0000QJ_0002 CGP
CIL_0000QI CIL_0000QI_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003974 spoplb protein_coding Danio_rerio
ENSDARG00000010563 spopla protein_coding Danio_rerio
ENSG00000144228 SPOPL speckle-type POZ protein-like protein_coding Homo_sapiens

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