ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026848 Tor1b 10090 + 2:30952959-30959015 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028199 Tor1b-001 30952959-30959015 protein_coding
  ENSMUST00000132514 Tor1b-006 30953752-30956873 nonsense_mediated_decay
  ENSMUST00000133544 Tor1b-003 30952979-30959011 retained_intron
  ENSMUST00000135507 Tor1b-004 30952991-30956494 nonsense_mediated_decay
  ENSMUST00000155213 Tor1b-005 30953172-30956985 retained_intron
  ENSMUST00000156711 Tor1b-002 30953187-30959012 nonsense_mediated_decay
  ENSMUST00000195010 Tor1b-007 30955253-30957112 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028199ENSMUST00000133544ENSMUST00000156711
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028199 19.083±4.44 10.043±0.32 3.916±1.29
ENSMUST00000133544 4.891±1.31 2.463±0.07 0.761±0.05
ENSMUST00000156711 N/A 4.164±2.08 3.114±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005UB CIL_0005UB_0002 CGP
CIL_0002LZ CIL_0002LZ_0004 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0006200 ISS ATP catabolic process
GO:0007029 ISS endoplasmic reticulum organization
GO:0016020 IEA membrane
GO:0016887 ISS ATPase activity
GO:0051085 IEA chaperone mediated protein folding requiring cofactor
GO:0051260 IDA protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0071763 IGI nuclear membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026895 tor1l3 protein_coding Danio_rerio
ENSDARG00000055856 tor1l1 protein_coding Danio_rerio
ENSDARG00000077950 tor1 protein_coding Danio_rerio
ENSDARG00000090741 AL954146.4 protein_coding Danio_rerio
ENSG00000136816 TOR1B torsin family 1, member B (torsin B) protein_coding Homo_sapiens

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