ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026849 Tor1a 10090 - 2:30960627-30967933 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028200 Tor1a-001 30960627-30967933 protein_coding
  ENSMUST00000123762 Tor1a-004 30961053-30963875 retained_intron
  ENSMUST00000137694 Tor1a-002 30960680-30967872 retained_intron
  ENSMUST00000143199 Tor1a-003 30966911-30967888 retained_intron
  ENSMUST00000144152 Tor1a-005 30961012-30963848 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028200ENSMUST00000137694
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028200 31.237±1.52 14.700±10.00 18.256±2.25
ENSMUST00000137694 N/A 3.047±0.06 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002LZ CIL_0002LZ_0004 CGP
CIL_0005UA CIL_0005UA_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000338 ISS protein deneddylation
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0005856 IEA cytoskeleton
GO:0006200 IEA ATP catabolic process
GO:0006979 IEA response to oxidative stress
GO:0006996 IMP organelle organization
GO:0006998 IMP nuclear envelope organization
GO:0007155 ISS cell adhesion
GO:0008021 ISS synaptic vesicle
GO:0008092 IPI cytoskeletal protein binding
GO:0016020 IEA membrane
GO:0016887 ISS ATPase activity
GO:0019894 IEA kinesin binding
GO:0030054 IEA cell junction
GO:0030141 ISS secretory granule
GO:0030426 ISS growth cone
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0031175 ISS neuron projection development
GO:0031965 IEA nuclear membrane
GO:0034504 IMP protein localization to nucleus
GO:0042406 ISS extrinsic component of endoplasmic reticulum membrane
GO:0043005 IEA neuron projection
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044319 IMP wound healing, spreading of cells
GO:0045104 ISS intermediate filament cytoskeleton organization
GO:0048489 ISS synaptic vesicle transport
GO:0051085 IEA chaperone mediated protein folding requiring cofactor
GO:0051260 IDA protein homooligomerization
GO:0051584 ISS regulation of dopamine uptake involved in synaptic transmission
GO:0051787 IPI misfolded protein binding
GO:0061077 ISS chaperone-mediated protein folding
GO:0070062 IEA extracellular vesicular exosome
GO:0071712 IDA ER-associated misfolded protein catabolic process
GO:0071763 IMP nuclear membrane organization
GO:0072321 ISS chaperone-mediated protein transport
GO:1900244 ISS positive regulation of synaptic vesicle endocytosis
GO:2000008 ISS regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026895 tor1l3 protein_coding Danio_rerio
ENSDARG00000055856 tor1l1 protein_coding Danio_rerio
ENSDARG00000077950 tor1 protein_coding Danio_rerio
ENSDARG00000090741 AL954146.4 protein_coding Danio_rerio
ENSG00000136827 TOR1A torsin family 1, member A (torsin A) protein_coding Homo_sapiens

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