ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027184 Caprin1 10090 - 2:103762941-103797649 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028607 Caprin1-001 103762941-103797649 protein_coding
  ENSMUST00000111147 Caprin1-002 103765018-103797104 protein_coding
  ENSMUST00000128477 Caprin1-011 103773471-103775654 processed_transcript
  ENSMUST00000132537 Caprin1-013 103771711-103774272 retained_intron
  ENSMUST00000137390 Caprin1-012 103773001-103776008 retained_intron
  ENSMUST00000137572 Caprin1-010 103772749-103773712 processed_transcript
  ENSMUST00000141750 Caprin1-007 103777963-103796933 processed_transcript
  ENSMUST00000143188 Caprin1-008 103772998-103779368 protein_coding
  ENSMUST00000143349 Caprin1-016 103767107-103772781 protein_coding
  ENSMUST00000145606 Caprin1-015 103767812-103771793 protein_coding
  ENSMUST00000145697 Caprin1-004 103779524-103796544 processed_transcript
  ENSMUST00000145770 Caprin1-005 103782521-103796973 retained_intron
  ENSMUST00000146527 Caprin1-003 103796452-103797599 retained_intron
  ENSMUST00000149175 Caprin1-014 103768450-103772684 retained_intron
  ENSMUST00000155733 Caprin1-006 103782919-103796868 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028607ENSMUST00000111147ENSMUST00000132537ENSMUST00000143188ENSMUST00000143349
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028607 N/A N/A 6.144±0.00
ENSMUST00000111147 179.738±11.42 49.495±17.42 103.907±32.84
ENSMUST00000132537 N/A 32.707±0.00 N/A
ENSMUST00000143188 N/A 217.628±114.21 N/A
ENSMUST00000143349 N/A N/A 17.207±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000929 CIL_000929_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000932 ISS cytoplasmic mRNA processing body
GO:0003723 ISS RNA binding
GO:0005737 IEA cytoplasm
GO:0010494 ISS cytoplasmic stress granule
GO:0016020 IEA membrane
GO:0017148 ISS negative regulation of translation
GO:0042995 IEA cell projection
GO:0044822 IEA poly(A) RNA binding
GO:0050775 IMP positive regulation of dendrite morphogenesis
GO:0061003 IMP positive regulation of dendritic spine morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009346 caprin1a protein_coding Danio_rerio
ENSG00000135387 CAPRIN1 cell cycle associated protein 1 protein_coding Homo_sapiens

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