ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027244 Atg13 10090 - 2:91674618-91710576 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028678 Atg13-001 91674619-91710519 protein_coding
  ENSMUST00000076803 Atg13-002 91674618-91710576 protein_coding
  ENSMUST00000126000 Atg13-005 91676318-91682229 processed_transcript
  ENSMUST00000136412 Atg13-003 91688713-91705734 processed_transcript
  ENSMUST00000139548 Atg13-006 91676283-91679695 processed_transcript
  ENSMUST00000153631 Atg13-004 91679387-91685252 processed_transcript

Mus musculus Ensembl GRCm38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000028678ENSMUST00000076803
Transcript ID C166 Tie2+ EC mES
ENSMUST00000028678 N/A N/A 0.858±0.00
ENSMUST00000076803 19.359±3.18 5.993±3.11 4.834±1.62

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000182 CIL_000182_0002 CGP
CIL_000181 CIL_000181_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 ISS autophagic vacuole assembly
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0019901 IBA protein kinase binding
GO:0034273 IBA ATG1/UKL1 signaling complex
GO:0070969 IPI ULK1-ATG13-FIP200 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036040 atg13 protein_coding Danio_rerio
ENSG00000175224 ATG13 autophagy related 13 protein_coding Homo_sapiens

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