ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027778 Ift80 10090 - 3:68892499-69004570 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029347 Ift80-201 68892525-68994537 protein_coding
  ENSMUST00000107812 Ift80-001 68892499-69004543 protein_coding
  ENSMUST00000136176 Ift80-004 68893645-68920105 retained_intron
  ENSMUST00000136448 Ift80-002 68892499-69004559 retained_intron
  ENSMUST00000148031 Ift80-005 68967920-69004484 protein_coding
  ENSMUST00000152502 Ift80-003 68917445-69004498 retained_intron
  ENSMUST00000154741 Ift80-006 68963635-69004477 protein_coding
  ENSMUST00000169064 Ift80-202 68892525-69004570 protein_coding
  ENSMUST00000176135 Ift80-007 68973304-69004388 processed_transcript
  ENSMUST00000176189 Ift80-008 68914766-68915115 retained_intron
  ENSMUST00000176754 Ift80-009 68940128-68973745 processed_transcript
  ENSMUST00000192467 Ift80-010 69002295-69004525 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029347ENSMUST00000107812ENSMUST00000136176ENSMUST00000136448ENSMUST00000169064
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029347 1.187±0.00 N/A N/A
ENSMUST00000107812 1.438±0.09 N/A 0.566±0.10
ENSMUST00000136176 N/A 0.436±0.00 N/A
ENSMUST00000136448 N/A 0.406±0.20 0.226±0.00
ENSMUST00000169064 7.841±1.54 1.127±0.15 0.577±0.27

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004JR CIL_0004JR_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IGI osteoblast differentiation
GO:0002062 IGI chondrocyte differentiation
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0007224 IMP smoothened signaling pathway
GO:0030992 IDA intraciliary transport particle B
GO:0036064 ISO ciliary basal body
GO:0042073 IC intraciliary transport
GO:0042384 IMP cilium assembly
GO:0045880 IMP positive regulation of smoothened signaling pathway
GO:0050680 IMP negative regulation of epithelial cell proliferation
GO:0060271 IMP cilium morphogenesis
GO:0060349 IMP bone morphogenesis
GO:2000051 IGI negative regulation of non-canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038879 ift80 protein_coding Danio_rerio
ENSG00000068885 IFT80 intraflagellar transport 80 protein_coding Homo_sapiens

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