ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027829 Ccnl1 10090 - 3:65946151-65958249 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029416 Ccnl1-001 65946151-65958249 protein_coding
  ENSMUST00000122919 Ccnl1-004 65946151-65958199 retained_intron
  ENSMUST00000129002 Ccnl1-002 65946151-65958162 nonsense_mediated_decay
  ENSMUST00000132998 Ccnl1-012 65950407-65951868 retained_intron
  ENSMUST00000135719 Ccnl1-003 65946195-65958032 nonsense_mediated_decay
  ENSMUST00000142153 Ccnl1-005 65946509-65958163 retained_intron
  ENSMUST00000144810 Ccnl1-009 65947954-65956856 nonsense_mediated_decay
  ENSMUST00000145186 Ccnl1-010 65949901-65956889 nonsense_mediated_decay
  ENSMUST00000146284 Ccnl1-011 65951249-65952993 retained_intron
  ENSMUST00000148623 Ccnl1-008 65951434-65957653 retained_intron
  ENSMUST00000149160 Ccnl1-006 65948892-65958181 retained_intron
  ENSMUST00000149729 Ccnl1-014 65946782-65947998 retained_intron
  ENSMUST00000150304 Ccnl1-013 65948508-65950978 retained_intron
  ENSMUST00000154585 Ccnl1-007 65946151-65958169 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029416ENSMUST00000129002ENSMUST00000135719ENSMUST00000142153
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029416 N/A 39.746±11.36 9.581±3.55
ENSMUST00000129002 4.577±1.28 3.897±0.97 6.457±1.74
ENSMUST00000135719 9.248±2.03 21.438±16.27 N/A
ENSMUST00000142153 3.977±1.44 2.122±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00081H CIL_00081H_0002 VISTA
CIL_00028X CIL_00028X_0002 CGP
CIL_00028W CIL_00028W_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006396 IEA RNA processing
GO:0008023 ISA transcription elongation factor complex
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012140 ccnl1b protein_coding Danio_rerio
ENSDARG00000055124 ccnl1a protein_coding Danio_rerio
ENSG00000163660 CCNL1 cyclin L1 protein_coding Homo_sapiens

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