ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027971 Ndst4 10090 + 3:125404076-125728899 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000144344 Ndst4-003 125438714-125612408 protein_coding
  ENSMUST00000147016 Ndst4-002 125404090-125686644 retained_intron
  ENSMUST00000172632 Ndst4-004 125680997-125690938 processed_transcript
  ENSMUST00000173932 Ndst4-001 125404076-125728899 protein_coding
  ENSMUST00000174648 Ndst4-005 125680987-125728339 protein_coding
  ENSMUST00000198101 Ndst4-006 125710086-125724702 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000147016ENSMUST00000173932ENSMUST00000174648
Transcript ID Tie2+ EC mES
ENSMUST00000147016 0.011±0.00 0.003±0.00
ENSMUST00000173932 0.008±0.00 N/A
ENSMUST00000174648 0.005±0.00 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00005L CIL_00005L_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IDA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041776 ndst3 protein_coding Danio_rerio
ENSG00000138653 NDST4 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4 protein_coding Homo_sapiens

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