ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027977 Ndst3 10090 - 3:123526166-123690853 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029602 Ndst3-201 123526169-123672392 protein_coding
  ENSMUST00000124803 Ndst3-005 123528559-123619450 protein_coding
  ENSMUST00000132112 Ndst3-004 123526168-123619501 protein_coding
  ENSMUST00000132896 Ndst3-006 123556831-123576516 processed_transcript
  ENSMUST00000137404 Ndst3-002 123526166-123690853 nonsense_mediated_decay
  ENSMUST00000154668 Ndst3-001 123526168-123690853 protein_coding
  ENSMUST00000172537 Ndst3-008 123528688-123690280 protein_coding
  ENSMUST00000199046 Ndst3-003 123552590-123672577 retained_intron
  ENSMUST00000199825 Ndst3-007 123556660-123560129 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029602ENSMUST00000124803ENSMUST00000132112ENSMUST00000137404ENSMUST00000154668ENSMUST00000172537ENSMUST00000199046ENSMUST00000199825
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029602 N/A 0.006±0.00 0.006±0.00
ENSMUST00000124803 0.016±0.00 N/A N/A
ENSMUST00000132112 N/A N/A 0.018±0.00
ENSMUST00000137404 N/A 0.453±0.05 0.029±0.00
ENSMUST00000154668 N/A 0.395±0.00 N/A
ENSMUST00000172537 0.010±0.00 N/A 0.010±0.00
ENSMUST00000199046 N/A 0.004±0.00 0.031±0.00
ENSMUST00000199825 0.009±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003I1 CIL_0003I1_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0008146 IDA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030210 IEA heparin biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041776 ndst3 protein_coding Danio_rerio
ENSG00000164100 NDST3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 protein_coding Homo_sapiens

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