ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028134 Ptbp2 10090 - 3:119718742-119784466 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029780 Ptbp2-201 119718742-119783388 protein_coding
  ENSMUST00000195902 Ptbp2-007 119724107-119740510 protein_coding
  ENSMUST00000196066 Ptbp2-013 119760554-119783691 processed_transcript
  ENSMUST00000196203 Ptbp2-004 119720384-119740879 retained_intron
  ENSMUST00000196343 Ptbp2-010 119738722-119742768 retained_intron
  ENSMUST00000197387 Ptbp2-006 119720345-119726140 nonsense_mediated_decay
  ENSMUST00000197464 Ptbp2-011 119746635-119783286 protein_coding
  ENSMUST00000197833 Ptbp2-008 119720320-119783234 nonsense_mediated_decay
  ENSMUST00000198399 Ptbp2-003 119747911-119784464 processed_transcript
  ENSMUST00000198403 Ptbp2-012 119760556-119783307 protein_coding
  ENSMUST00000198733 Ptbp2-005 119720809-119724387 retained_intron
  ENSMUST00000199026 Ptbp2-002 119760549-119784466 processed_transcript
  ENSMUST00000200097 Ptbp2-001 119718742-119783804 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029780ENSMUST00000196343ENSMUST00000197464ENSMUST00000197833
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029780 19.094±0.78 3.298±1.41 12.199±0.94
ENSMUST00000196343 N/A 1.919±0.67 N/A
ENSMUST00000197464 N/A 4.200±1.54 N/A
ENSMUST00000197833 N/A 3.144±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00005S CIL_00005S_0002 CGP
CIL_0007J2 CIL_0007J2_0002 UCNEbase

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005681 IDA spliceosomal complex
GO:0006376 IDA mRNA splice site selection
GO:0033119 IEA negative regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:2000177 IMP regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015901 ptbp2b protein_coding Danio_rerio
ENSG00000117569 PTBP2 polypyrimidine tract binding protein 2 protein_coding Homo_sapiens

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