ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028137 Celf3 10090 + 3:94478295-94492198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029784 Celf3-001 94478831-94492193 protein_coding
  ENSMUST00000196985 Celf3-013 94486646-94488611 retained_intron
  ENSMUST00000197033 Celf3-014 94487202-94489607 retained_intron
  ENSMUST00000197558 Celf3-004 94478335-94492193 protein_coding
  ENSMUST00000197677 Celf3-012 94484364-94486939 protein_coding
  ENSMUST00000197699 Celf3-008 94482722-94492193 processed_transcript
  ENSMUST00000198067 Celf3-011 94482555-94487211 processed_transcript
  ENSMUST00000198316 Celf3-002 94478296-94492188 protein_coding
  ENSMUST00000198384 Celf3-015 94484371-94487284 protein_coding
  ENSMUST00000198796 Celf3-009 94485277-94492182 retained_intron
  ENSMUST00000199148 Celf3-006 94484327-94492193 retained_intron
  ENSMUST00000199159 Celf3-007 94479117-94487568 retained_intron
  ENSMUST00000199775 Celf3-005 94479078-94492194 protein_coding
  ENSMUST00000199884 Celf3-010 94478295-94485318 protein_coding
  ENSMUST00000200342 Celf3-003 94478494-94492198 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000029784ENSMUST00000196985ENSMUST00000197033ENSMUST00000197699ENSMUST00000198067ENSMUST00000198316ENSMUST00000198384ENSMUST00000198796ENSMUST00000199148ENSMUST00000199775ENSMUST00000200342
Transcript ID C166 Tie2+ EC mES
ENSMUST00000029784 0.033±0.00 N/A N/A
ENSMUST00000196985 0.119±0.04 N/A 0.180±0.00
ENSMUST00000197033 0.034±0.00 N/A N/A
ENSMUST00000197699 0.058±0.02 N/A N/A
ENSMUST00000198067 0.029±0.00 N/A N/A
ENSMUST00000198316 0.025±0.00 0.142±0.00 N/A
ENSMUST00000198384 0.100±0.03 N/A N/A
ENSMUST00000198796 0.011±0.00 N/A N/A
ENSMUST00000199148 N/A N/A 0.071±0.02
ENSMUST00000199775 N/A 0.137±0.00 N/A
ENSMUST00000200342 0.021±0.01 0.094±0.00 N/A

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000381 IEA regulation of alternative mRNA splicing, via spliceosome
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006397 IEA mRNA processing
GO:0007283 IMP spermatogenesis
GO:0008380 IEA RNA splicing
GO:0030317 IMP sperm motility
GO:0048026 ISS positive regulation of mRNA splicing, via spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006983 celf3b protein_coding Danio_rerio
ENSDARG00000034668 celf3a protein_coding Danio_rerio
ENSG00000159409 CELF3 CUGBP, Elav-like family member 3 protein_coding Homo_sapiens

Loading